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Free Desktop App · Open Source Workflow

Visual workflows
for scientific computing

Build, run, and share computational pipelines with drag-and-drop nodes. Molecular dynamics, structure prediction, docking — on your machine, with cloud GPUs when you need them.

v0.3.1 · macOS (Apple Silicon & Intel) · Linux · Windows · Free

The Salpa workflow canvas with an 11-node pipeline from PDB structure to GROMACS molecular dynamics

PDBmdAuto — an 11-node pipeline from PDB structure to GROMACS MD, on the Salpa canvas

Built-in & cloud nodes for

GROMACSPDB2PQRProMod3xTBBoltz-2Chai-1DiffDockProteinMPNNEvo2
Why Salpa

Empowering workflows,
not technical burdens

Computational science has powerful tools — but wiring them together remains a technical challenge. Here is how the current landscape looks.

Web Platforms

e.g. Galaxy

  • User-friendly interface
  • Managed infrastructure
  • Data must leave your machine
  • Limited to pre-installed tools

Script Pipelines

e.g. Nextflow, Snakemake

  • Powerful and flexible
  • Reproducible environments
  • DSL required — steep learning curve
  • Limited adoption by non-programmers

Wrapped Packages

e.g. Python packages with config files

  • Familiar Python ecosystem
  • Convenient for single tools
  • Workflow features are an afterthought
  • Extending means reverse-engineering
Open AccessOpen DataOpen SourceOpen ProtocolsOpen Workflows

Open science solved access, data, source, and protocols. Salpa targets the remaining gap — making workflows approachable for both developers and domain scientists.

What Salpa delivers

Everything a pipeline needs, in the box

Visual Workflow Canvas

Drag nodes onto a canvas and wire them together. What Nextflow and Snakemake ask for in DSL code, Salpa does with drag and drop — accessible to every scientist, not just programmers.

Connected nodes on the real Salpa canvas: Multi-Chain Alignment, Merge PDB Chains, Fix Missing Residues, pKa + GROMACS EM, and more

Real capture — the PDBmdAuto template on the canvas

Pure-Python Nodes

Your script becomes a visual node with an auto-generated panel. No framework, no server, no XML.

Zero-Config Environments

Each node resolves its own isolated environment. No pip conflicts, no Docker.

Local · Cloud · HPC

One interface for every execution target, with live progress.

Local — defaultCloud — A100 · H100HPC — SLURM

Your Workflow Is a File

Every pipeline exports as a plain, portable file — share it, rerun it anywhere, attach it to a paper. Reproducibility is the default, not an afterthought.

Marketplace & Hub

Install community nodes from the open Salpa Hub, GitHub, or local folders. No lock-in.

The real Salpa node library after installing from the Hub: Metal Docking (6 nodes), Cloud (5), Hello World (3)

Real capture — the library after a Hub install

Data Sovereignty

Your data stays on your machine — always. Cloud runs are opt-in, ephemeral, no retention.

Local-firstOpt-in cloudNo retention
Our principles

Five principles, chained like a pipeline

S

Simple

Complexity absorbed, simplicity delivered.

Workflows by drag and drop. Nodes in pure Python.

O

Open

See, change, and share how it works.

Open-source nodes and workflows, community-driven.

L

Local

Privacy by default, not by request.

Your machine is the hub; results flow back to you.

V

Visual

See your pipeline, not just read it.

Every connection, parameter, and result on the canvas.

E

Extensible

Integration over reinvention.

Wrap any tool or service into a shareable node.

How it works

See Salpa in action

Drag nodes onto the canvas, connect them, configure each step in a panel, and execute with one click — live logs included.

Open a real pipeline

A 15-node metallopeptide MD workflow — node library, canvas, and execution panels in one pass.

Cloud computing

Free GPU computing
with a free account

Run deep-learning models that need heavy GPUs and complex environments — directly from Salpa. Register with your email or Google account and start computing.

5 models
Live GPU nodes
Structure, docking, design, genomics
A100 · H100
Managed hardware
Complex environments deployed for you
$0
Free tier, no card
Fair-use quota — contact us for more
Boltz-2Chai-1DiffDockProteinMPNNEvo2

More cloud nodes coming. Need a specific model? Suggest a tool — we deploy fast.

Get started

Ready to run your first workflow?

Free on macOS, Linux, and Windows — your first pipeline runs in minutes.

Salpa is in active development with early users — your feedback shapes what we build next. Early adopters get:

Fast Bug Fixes

Report issues and get fixes within days, not months.

Node Dev Help

We help you build custom computational nodes for your research.

HPC Integration

Connect Salpa to your institution's SLURM clusters.

Feature Requests

Suggest workflows, cloud nodes, and tools. Your ideas shape the roadmap.

Reach out anytime

hello@salpa.app